Directory

Stephen Boppart's directory photo.

Stephen Boppart

Professor

Primary Affiliation

Extracellular Vesicle Imaging and Therapy

Affiliations

Status Full-time Faculty

Home Department of Electrical and Computer Engineering

Phone 244-7479

Email boppart@illinois.edu

Address 4351 Beckman Institute, 405 North Mathews Avenue

  • Biography

    Stephen Boppart is a Professor and Grainger Distinguished Chair in Engineering at the University of Illinois at Urbana-Champaign (UIUC). He holds appointments in the Departments of Electrical and Computer Engineering, Bioengineering, and the Beckman Institute for Advanced Science and Technology. He is serving as Interim Director of the Interdisciplinary Health Sciences Institute (IHSI), Director of the NIH/NIBIB P41 Center for Label-free Imaging and Multi-scale Biophotonics (CLIMB), Director of the GSK Center for Optical Molecular Imaging, and Head of the Biophotonics Imaging Laboratory. His lab is focused on developing novel optical biomedical diagnostic and imaging technologies and translating these into clinical applications.

    A strong advocate for the integration of engineering, technology, and medicine to advance human health and health care, Professor Boppart is chairing the Chancellor’s Health Innovation Visioning Committee, and played an active role in the visioning, development, and launch of the new engineering-based Carle Illinois College of Medicine.

    He received his Ph.D. in Medical and Electrical Engineering from MIT, his M.D. degree from Harvard Medical School, and specialty training in internal medicine. He has published over 450 invited and contributed publications, delivered over 1000 invited and contributed presentations, and has over 50 patents related to optical biomedical imaging technology. He has mentored more than 200 interdisciplinary undergraduate, graduate, and post-graduate researchers.

    Prof. Boppart has co-founded four start-up companies to commercialize and disseminate his optical technologies for biomedical imaging and was recently elected a member of the National Academy of Inventors. He established and served as Director of Imaging at Illinois, a university-wide program to integrate imaging science, technology, and applications across multiple modalities and fields, and as part of his role in IHSI, is serving as the Illinois Chair for the Mayo Clinic & Illinois Alliance for Technology-Based Healthcare.

    Education

    • M.D., medicine, Harvard Medical School, 2000

    • Ph.D., medical and electrical engineering, Massachusetts Institute of Technology, 1998

  • Honors

    • 2022: University Excellence in Graduate Student Mentoring Award

    • 2021: Fellow, International Academy of Medical and Biological Engineering

    • 2020: Grainger Distinguished Chair in Engineering

    • 2020: SPIE PRISM Award for Industrial Innovation in Healthcare

    • 2019: Fellow, National Academy of Inventors

    • 2019: Microscopy Today Innovation Award, One of ten best microscopy innovations

    • 2019: SPIE Biophotonics Technology Innovator Award

    • 2018: SPIE Photonics West Start-Up Challenge, First Place to PhotoniCare

    • 2017: Fellow, Biomedical Engineering Society (BMES)

    • 2016: IEEE Engineering in Medicine and Biology Society Technical Achievement Award

    • 2015: iBIO Propel Chicago Innovation Showcase Business Competition (1st and 2nd place for start-ups)

     

     

  • Research

    Research interests:

    • Optical Diagnostics of Cancer

    • Medical Engineering

    • Image-Guided Surgery

    • Optical Coherence Tomography

    • Lasers in Medicine and Biology

    • Optical Biomedical Imaging

    • Neurophotonics

    • Primary Care Imaging (ear, eye, skin, oral)

    • Imaging Biofilms and Microbiomes

    Prof. Stephen Boppart is interested in using light to image biological tissue and diagnose disease. Using advanced imaging techniques such as optical coherence tomography (OCT), nonlinear interferometric vibrational imaging (NIVI), interferometric synthetic aperture microscopy (ISAM), and multi-photon microscopy, it is feasible to generate high-resolution, real-time, non-invasive images of biological tissue at the cellular and molecular level for diagnosing diseases such as cancer. As imaging trends progress to the molecular level, the origin of virtually all disease processes, the ability to image or map the location of endogenous molecules or exogenous molecularly targeted contrast agents will become important for diagnosis. Prof. Boppart's research spans a wide range of novel optical technologies, systems, methods, and applications including molecular imaging, novel contrast agents for OCT, functional OCT for imaging neural activity and physiological parameters, and multi-modality optical imaging techniques for tracking the growth and development of engineering tissues, tumors, and biological specimens. Prof. Boppart also has translated many of these optical diagnostic technologies into clinical studies with several ongoing patient trials at local medical institutions.

  • 2022

    • Choi H, Zaki FR, Monroy GL, Won J, Boppart SA. Imaging and characterization of transitions in biofilm morphology via anomalous diffusion following environmental perturbation. Biomedical Optics Express, 13:1654-1670, 2022.
    • Deng Y-H, Ricciardulli T, Won J, Wade MA, Rogers SA, Boppart SA, Flaherty DW, Kong H. Self-locomotive, antimicrobial microrobot (SLAM) swarm for enhanced biofilm elimination. Biomaterials, 287:121610, 2022.
    • Iyer RR, Liu Y-Z, Renteria C, Zurauskas M, Boppart SA. Ultra-parallel label-free optophysiology of neural activity. iScience, 25:104307, 2022.
    • Iyer RR, Renteria CA, Yang L, Sorrells JE, Park J, Sun L, Yu Z, Huang Y, Marjanovic M, Mirica LM, Boppart SA. Tracking the binding of multi-functional fluorescent tags for Alzheimer’s disease using quantitative multiphoton microscopy. Journal of Biophotonics, 15:e202200105, doi:10.1002/jbio.202200105, 2022.
    • Iyer RR, Sorrells JE, Yang L, Chaney EJ, Spillman DR, Tibble BE, Renteria CA, Tu H, Zurauskas M, Marjanovic M, Boppart SA. Label-free metabolic and structural profiling of dynamic biological samples using multimodal optical microscopy with sensorless adaptive optics. Scientific Reports, 12:3438, 2022.
    • Locke AK*, Zaki FR*, Fitzgerald S, Sudhir K, Monroy GL, Choi H, Won J, Mahadevan-Jansen A, Boppart SA. Differentiation of otitis media-causing bacteria and biofilms via Raman spectroscopy and optical coherence tomography. Frontiers in Cellular and Infection Microbiology: Identification of Micro-Organisms through Label-Free Optical Methods, 12:869761, doi:10.3389/fcimb.2022.869761.
    • Monroy GL, Fitzgerald ST, Locke A, Won J, Spillman DR, Ho A, Zaki FR, Choi H, Chaney EJ, Werkhaven JA, Mason KM, Mahadevan-Jansen A, Boppart SA. Multimodal handheld probe for characterizing otitis media – Integrating Raman spectroscopy and optical coherence tomography. Frontiers in Photonics: Biophotonics, doi: 10.3389/fphot.2022.929574, 2022.
    • Monroy GL, Won J, Shi J, Hill MC, Porter RG, Novak MA, Hong W, Khampang P, Kerschner JE, Spillman DR, Boppart SA. Automated classification of otitis media with OCT: Augmenting pediatric image datasets with gold-standard animal model data. Biomedical Optics Express, 13:3601-3614, 2022.
    • Sorrells JE, Iyer RR, Yang L, Martin EM, Wang G, Tu H, Marjanovic M, Boppart SA. Computational photon counting using multi-threshold peak detection for fast fluorescence lifetime imaging microscopy. ACS Photonics, 9:2748-2755, 2022.
    • Yang L, Park J, Chaney EJ, Sorrells JE, Marjanovic M, Phillips H, Spillman DR, Boppart SA. Label-free multimodal nonlinear optical imaging of needle biopsy cores for intraoperative cancer diagnosis. Journal of Biomedical Optics, 27:056504, 2022.

    2021

    • Bower AJ, Renteria C, Li J, Marjanovic M, Barkalifa R, Boppart, SA 2021, ‘High-speed label-free two-photon fluorescence and lifetime imaging microscopy of metabolic transients during neuronal activity’ Applied Physics Letters, 118:081104
    • Dornbusch JA, Selmic LE, Samuelson J, Reagan JK, McLaughlin E, Wavreille VA, Ogden J, Abrams B, Kalamaras A, Green E, Hostnik E, Every L, Fuerst J, Jennings R, Premanandan C, Lorback J, Linn SC, Huang P-C, Alex A, Sorrells JE, Yang L, Boppart SA, 2021, ‘Diagnostic accuracy of optical coherence tomography for assessing surgical margins of canine soft tissue sarcomas in observers of different specialties’, Veterinary Surgery, 50:111-120
    • Iyer, RR, Žurauskas, M, Cui, Q, Gao, L, Smith, RT & Boppart, SA 2020, 'Full-field spectral-domain optical interferometry for snapshot three-dimensional microscopy', Biomedical Optics Express, vol. 11, no. 10, pp. 5903-5919. DOI: 10.1364/BOE.402796
    • Monroy, GL, Won, J, Spillman, DR, Dsouza, R & Boppart, SA 2017, 'Clinical translation of handheld optical coherence tomography: Practical considerations and recent advancements', Journal of Biomedical Optics, vol. 22, no. 12, 121715. DOI: 10.1117/1.JBO.22.12.121715
    • Sorrells JE, Iyer RR, Yang L, Spillman DR, Chaney EJ, Tu H, Boppart?SA 2021, ‘Real-time pixelwise phasor analysis for video-rate two-photon fluorescence lifetime imaging microscopy’, Biomedical Optics Express, 12:4003-4019
    • Sternisha SM, Mukherjee P, Alex A, Chaney EJ, Barkalifa R, Wan B, Lee J-H, Rico-Jimenez J, Zurauskas M, Spillman DR, Sripada SA, Marjanovic M, Arp Z, Bhanushali DS, Hood SR, Bose S, Boppart, SA 2021, ‘Longitudinal monitoring of cell metabolism in biopharmaceutical production using label-free fluorescence lifetime imaging microscopy (FLIM)’, Biotechnology Journal, 16:2000629
    • Sun Y, Wang J, Shi J, Boppart, SA 2021, ‘Synthetic polarization-sensitive optical coherence tomography by deep learning’, npj Digital Medicine, 4:105
    • Won J, Porter RG, Novak MA, Youakim J, Sum A, Barkalifa R, Aksamitiene E, Zhang A, Nolan RM, Shelton RL, Boppart, SA 2021, ‘In vivo dynamic characterization of the human tympanic membrane using pneumatic optical coherence tomography’, Journal of Biophotonics, 14:e202000215
    • You S, Chaney EJ, Tu H, Sinha S, Boppart, SA 2021, ‘Label-free deep profiling of the tumor microenvironment’, Cancer Research, 81:2534-2544
    • Zurauskas M, Iyer RR, Boppart. SA 2021, Simultaneous 4-phase-shifted full-field optical coherence microscopy’, Biomedical Optics Express, 12:981-992

    2020

    • Dsouza, R, Spillman, DR, Barrows, S, Golemon, T & Boppart, SA 2020, 'Development of a Smartphone-Based Skin Simulation Model for Medical Education', Simulation in Healthcare : Journal of the Society for Simulation in Healthcare. DOI: 10.1097/SIH.0000000000000509
    • Huang, C, Sun, PP, Won, J, Wang, Y, Boppart, SA & Nguyen, TH 2020, 'Effect of Nonphosphorus Corrosion Inhibitors on Biofilm Pore Structure and Mechanical Properties', Environmental Science & Technology 54:14716-14724. DOI: 10.1021/acs.est.0c04645
    • Erickson-Bhatt, SJ, Simpson, DG & Boppart, SA 2020, 'Statistical evaluation of reader variability in assessing the diagnostic performance of optical coherence tomography', Journal of Biomedical Optics, vol. 25, no. 11. DOI: 10.1117/1.JBO.25.11.116002
    • Fabelo, C, Selmic, L, Huang, PC, Samuelson, JP, Reagan, JK, Kalamaras, A, Wavreille, V, Monroy, GL, Marjanovic, M & Boppart, SA 2020, 'Evaluating optical coherence tomography for surgical margin assessment of canine mammary tumors', Veterinary and Comparative Oncology. DOI: 10.1111/vco.12632
    • Liu, Y-Z, Renteria, C, Courtney, CD, Ibrahim, B, You, S, Chaney, EJ, Barkalifa, R, Iyer, RR, Zurauskas, M, Tu, H, Llano, DA, Christian-Hinman, CA & Boppart, SA 2020, 'Simultaneous two-photon activation and imaging of neural activity based on spectral-temporal modulation of supercontinuum light', Neurophotonics, vol. 7, no. 4, pp. 045007.DOI: 10.1117/1.NPh.7.4.045007
    • Sun, Y, You, S, Du, X, Spaulding, A, George Liu, Z, Chaney, EJ, Spillman, DR, Marjanovic, M, Tu, H & Boppart, SA 2020, 'Real-time three-dimensional histology-like imaging by label-free nonlinear optical microscopy', Quantitative Imaging in Medicine and Surgery, vol. 10, no. 11, pp. 2177-2190. DOI: 10.21037/QIMS-20-381
    • Zhao, Y, Maguluri, G, Ferguson, RD, Tu, H, Paul, K, Boppart, SA, Llano, DA & Iftimia, N 2020, 'Two-photon microscope using a fiber-based approach for supercontinuum generation and light delivery to a small-footprint optical head', Optics Letters, vol. 45, no. 4, pp. 909-912. DOI: 10.1364/OL.381571

    2019

    • Boppart, SA, You, S, Li, L, Chen, J & Tu, H 2019, 'Simultaneous label-free autofluorescence-multiharmonic microscopy and beyond', APL Photonics, vol. 4, no. 10, 100901. DOI: 10.1063/1.5098349
    • Borhani, N, Bower, AJ, Boppart, SA & Psaltis, D 2019, 'Digital staining through the application of deep neural networks to multi-modal multi-photon microscopy', Biomedical Optics Express, vol. 10, no. 3, 355205, pp. 1339-1350. DOI: 10.1364/BOE.10.001339
    • Liu, Y, Tu, H, You, S, Chaney, EJ, Marjanovic, M & Boppart, SA 2019, 'Label-free molecular profiling for identification of biomarkers in carcinogenesis using multimodal multiphoton imaging', Quantitative Imaging in Medicine and Surgery, vol. 9, no. 5, pp. 742-756. DOI: 10.21037/qims.2019.04.16
    • Marjanovic, M, Nguyen, FT, Ahmad, A, Huang, PC, Suslick, KS & Boppart, SA 2019, 'Characterization of Magnetic Nanoparticle-Seeded Microspheres for Magnetomotive and Multimodal Imaging', IEEE Journal of Selected Topics in Quantum Electronics, vol. 25, no. 1, 8411481. DOI: 10.1109/JSTQE.2018.2856582
    • Shemonski, ND, Liu, YZ, South, FA & Boppart, SA 2019, Computational adaptive optics for broadband optical interferometric tomography of biological tissue. in Wavefront Shaping for Biomedical Imaging. Cambridge University Press, pp. 1-19. DOI: 10.1017/9781316403938.018
    • South, FA, Liu, YZ, Huang, PC, Kohlfarber, T & Boppart, SA 2019, 'Local wavefront mapping in tissue using computational adaptive optics OCT', Optics Letters, vol. 44, no. 5, pp. 1186-1189. DOI: 10.1364/OL.44.001186
    • You, S, Barkalifa, R, Chaney, EJ, Tu, H, Park, J, Sorrells, JE, Sun, Y, Liu, YZ, Yang, L, Chen, DZ, Marjanovic, M, Sinha, S & Boppart, SA 2019, 'Label-free visualization and characterization of extracellular vesicles in breast cancer', Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 48, pp. 24012-24018. DOI: 10.1073/pnas.1909243116
    • You, S, Sun, Y, Yang, L, Park, J, Tu, H, Marjanovic, M, Sinha, S & Boppart, SA 2019, 'Real-time intraoperative diagnosis by deep neural network driven multiphoton virtual histology', npj Precision Oncology, vol. 3, no. 1, 33. DOI: 10.1038/s41698-019-0104-3

    2018

    • Alex, A, Frey, S, Angelene, H, Neitzel, CD, Li, J, Bower, AJ, Spillman, DR, Marjanovic, M, Chaney, EJ, Medler, JL, Lee, W, Vasist Johnson, LS, Boppart, SA & Arp, Z 2018, 'In situ biodistribution and residency of a topical anti-inflammatory using fluorescence lifetime imaging microscopy', British Journal of Dermatology, vol. 179, no. 6, pp. 1342-1350. DOI: 10.1111/bjd.16992
    • Boppart, SA, Brown, JQ, Farah, CS, Kho, E, Marcu, L, Saunders, CM & Sterenborg, HJCM 2018, 'Label-free optical imaging technologies for rapid translation and use during intraoperative surgical and tumor margin assessment', Journal of Biomedical Optics, vol. 23, no. 2, 021104. DOI: 10.1117/1.JBO.23.2.021104
    • Bower, AJ, Li, J, Chaney, EJ, Marjanovic, M, Spillman, DR & Boppart, SA 2018, 'High-speed imaging of transient metabolic dynamics using two-photon fluorescence lifetime imaging microscopy', Optica, vol. 5, no. 10, pp. 1290-1296. DOI: 10.1364/OPTICA.5.001290
    • Dsouza, R, Won, J, Monroy, GL, Hill, MC, Porter, RG, Novak, MA & Boppart, SA 2018, 'In vivo detection of nanometer-scale structural changes of the human tympanic membrane in otitis media', Scientific Reports, vol. 8, no. 1, 8777. DOI: 10.1038/s41598-018-26514-1
    • Erickson-Bhatt, SJ, Mesa, KJ, Marjanovic, M, Chaney, EJ, Ahmad, A, Huang, PC, Liu, ZG, Cunningham, K & Boppart, SA 2018, 'Intraoperative optical coherence tomography of the human thyroid: Feasibility for surgical assessment', Translational Research, vol. 195, pp. 13-24. DOI: 10.1016/j.trsl.2017.12.001
    • Huang, PC, Chaney, EJ, Shelton, RL & Boppart, SA 2018, 'Magnetomotive Displacement of the Tympanic Membrane Using Magnetic Nanoparticles: Toward Enhancement of Sound Perception', IEEE Transactions on Biomedical Engineering, vol. 65, no. 12, 8325518, pp. 2837-2846. DOI: 10.1109/TBME.2018.2819649
    • South, FA, Kurokawa, K, Liu, Z, Liu, YZ, Miller, DT & Boppart, SA 2018, 'Combined hardware and computational optical wavefront correction', Biomedical Optics Express, vol. 9, no. 6, #322898, pp. 2562-2574. DOI: 10.1364/BOE.9.002562
    • You, S, Tu, H, Chaney, EJ, Sun, Y, Zhao, Y, Bower, AJ, Liu, YZ, Marjanovic, M, Sinha, S, Pu, Y & Boppart, SA 2018, 'Intravital imaging by simultaneous label-free autofluorescence-multiharmonic microscopy', Nature Communications, vol. 9, no. 1, 2125. DOI: 10.1038/s41467-018-04470-8

    2017

    • Bower, AJ, Chidester, B, Li, J, Zhao, Y, Marjanovic, M, Chaney, EJ, Do, MN & Boppart, SA 2017, 'A quantitative framework for the analysis of multimodal optical microscopy images', Quantitative Imaging in Medicine and Surgery, vol. 7, no. 1, pp. 24-37. DOI: 10.21037/qims.2017.02.07
    • Bower, AJ, Mahmassani, Z, Zhao, Y, Chaney, EJ, Marjanovic, M, Lee, MK, Graf, BW, De Lisio, M, Kong, H, Boppart, MD & Boppart, SA 2017, 'In Vivo Assessment of Engineered Skin Cell Delivery with Multimodal Optical Microscopy', Tissue Engineering - Part C: Methods, vol. 23, no. 7, pp. 434-442. DOI: 10.1089/ten.tec.2017.0185
    • Bower, AJ, Marjanovic, M, Zhao, Y, Li, J, Chaney, EJ & Boppart, SA 2017, 'Label-free in vivo cellular-level detection and imaging of apoptosis', Journal of Biophotonics, vol. 10, no. 1, pp. 143-150. DOI: 10.1002/jbio.201600003
    • Liu, X, Laegsgaard, J, Iegorov, R, Svane, AS, Ilday, FÖ, Tu, H, Boppart, SA & Turchinovich, D 2017, 'Nonlinearity-tailored fiber laser technology for low-noise, ultra-wideband tunable femtosecond light generation', Photonics Research, vol. 5, no. 6, 2327-9125/17/060750-12, pp. 750-761. DOI: 10.1364/PRJ.5.000750
    • Mesa, KJ, Selmic, LE, Pande, P, Monroy, GL, Reagan, J, Samuelson, J, Driskell, E, Li, J, Marjanovic, M, Chaney, EJ & Boppart, SA 2017, 'Intraoperative optical coherence tomography for soft tissue sarcoma differentiation and margin identification', Lasers in Surgery and Medicine, vol. 49, no. 3, pp. 240-248. DOI: 10.1002/lsm.22633
    • Tu, H, Liu, Y, Marjanovic, M, Chaney, EJ, You, S, Zhao, Y & Boppart, SA 2017, 'Concurrence of extracellular vesicle enrichment and metabolic switch visualized label-free in the tumor microenvironment', Science Advances, vol. 3, no. 1, e1600675. DOI: 10.1126/sciadv.1600675
    • Wang, H, Wang, R, Cai, K, He, H, Liu, Y, Yen, J, Wang, Z, Xu, M, Sun, Y, Zhou, X, Yin, Q, Tang, L, Dobrucki, IT, Dobrucki, LW, Chaney, EJ, Boppart, SA, Fan, TM, Lezmi, S, Chen, X, Yin, L & Cheng, J 2017, 'Selective in vivo metabolic cell-labeling-mediated cancer targeting', Nature chemical biology, vol. 13, no. 4, pp. 415-424. DOI: doi.org/10.1038/nchembio.2297
    • You, S, Liu, Y, Arp, Z, Zhao, Y, Chaney, EJ, Marjanovic, M & Boppart, SA 2017, 'Intracellular imaging of docosanol in living cells by coherent anti-Stokes Raman scattering microscopy', Journal of Biomedical Optics, vol. 22, no. 7, 070502. DOI: 10.1117/1.JBO.22.7.070502

    2016

    • Bhaduri, B.; Nolan, R. M.; Shelton, R. L.; Pilutti, L. A.; Motl, R. W.; Moss, H. E.; Pula, J. H.; Boppart, S. A., Detection of Retinal Blood Vessel Changes in Multiple Sclerosis with Optical Coherence Tomography. Biomedical Optics Express 2016, 7, (6), 2321-2330, DOI:10.1364/Boe.7.002321.
    • Bower, A. J.; Li, J.; Arp, Z. A.; Marjanovic, M.; Zhao, Y.; Chaney, E. J.; Boppart, S. A., Longitudinal in vivo Tracking of Adverse Effects Following Topical Steroid Treatment. Experimental Dermatology 2016, 25, 362-367.
    • Bower, A. J.; Marjanovic, M.; Zhao, Y.; Li, J.; Chaney, E. J.; Boppart, S. A., In vivo Cellular-Level Detection and Imaging of Apoptosis. Journal of Biophotonics 2016, DOI:10.1002/jbio.201600003.
    • Huang, P. C.; Pande, P.; Ahmad, A.; Marjanovic, M.; Spillman, D. R.; Odintsov, B.; Boppart, S. A., Magnetomotive Optical Coherence Elastography for Magnetic Hyperthermia Dosimetry Based on Dynamic Tissue Biomechanics. IEEE Journal of Selected Topics in Quantum Electronics 2016, 22, (4), DOI:Artn 6802816 10.1109/Jstqe.2015.2505147.
    • Kim, J.; Ahmad, A.; Li, J.; Marjanovic, M.; Chaney, E. J.; Suslick, K. S.; Boppart, S. A., Intravascular Magnetomotive Optical Coherence Tomography of Targeted Early-Stage Atherosclerotic Changes in ex vivo Hyperlipidemic Rabbit Aortas. Journal of Biophotonics 2016, 9, (1-2), 109-116, DOI:10.1002/jbio.201400128.
    • Liu, X. M.; Svane, A. S.; Laegsgaard, J.; Tu, H. H.; Boppart, S. A.; Turchinovich, D., Progress in Cherenkov Femtosecond Fiber Lasers. Journal of Physics D-Applied Physics 2016, 49, (2), DOI:Artn 023001 10.1088/0022-3727/49/2/023001.
    • Monroy, G. L.; Pande, P.; Shelton, R. L.; Nolan, R. M.; Spillman, D. R.; Porter, R. G.; Novak, M. A.; Boppart, S. A., Non-Invasive Optical Assessment of Viscosity of Middle Ear Effusions in Otitis Media. Journal of Biophotonics 2016, DOI:10.1002/jbio.201500313.
    • Nolan, R. M.; Adie, S. G.; Marjanovic, M.; Chaney, E. J.; South, F. A.; Monroy, G. L.; Shemonski, N. D.; Erickson-Bhatt, S. J.; Shelton, R. L.; Bower, A. J.; Simpson, D. G.; Cradock, K. A.; Liu, Z. G.; Ray, P. S.; Boppart, S. A., Intraoperative Optical Coherence Tomography for Assessing Human Lymph Nodes for Metastatic Cancer. BMC Cancer 2016, 16, 144, DOI:ARTN 144 10.1186/s12885-016-2194-4.
    • Pande, P.; Monroy, G. L.; Nolan, R. M.; Shelton, R. L.; Boppart, S. A., Sensor-Based Technique for Manually Scanned Hand-Held Optical Coherence Tomography Imaging. Journal of Sensors 2016, DOI:Artn 8154809 10.1155/2016/8154809.
    • Shen, Y.; Huang, C. H.; Monroy, G. L.; Janjaroen, D.; Derlon, N.; Lin, J.; Espinosa-Marzal, R.; Morgenroth, E.; Boppart, S. A.; Ashbolt, N. J.; Liu, W. T.; Nguyen, T. H., Response of Simulated Drinking Water Biofilm Mechanical and Structural Properties to Long-Term Disinfectant Exposure. Environmental Science & Technology 2016, 50, (4), 1779-1787, DOI:10.1021/acs.est.5b04653.
    • South, F. A.; Liu, Y. Z.; Carney, P. S.; Boppart, S. A., Computed Optical Interferometric Imaging: Methods, Achievements, and Challenges. IEEE Journal of Selected Topics in Quantum Electronics 2016, 22, (3), DOI:Artn 6800911 10.1109/Jstqe.2015.2493962.
    • Tu, H. H.; Liu, Y.; Turchinovich, D.; Lyngso, J.; Laegsgaard, J.; Chaney, E. J.; Zhao, Y.; You, S.; Marjanovic, M.; Wilson, W. L.; Xu, B.; Dantus, M.; Boppart, S. A., Stain-Free Histopathology by Programmable Supercontinuum Pulses. Nature Photonics 2016, DOI:10.1038/nphoton.2016.94.
    • Xu, Y.; Liu, Y. Z.; Boppart, S. A.; Carney, P. S., Automated Interferometric Synthetic Aperture Microscopy and Computational Adaptive Optics for Improved Optical Coherence Tomography. Applied Optics 2016, 55, (8), 2034-2041, DOI:10.1364/Ao.55.002034.
    • Zhao, Y. B.; Shelton, R. L.; Tu, H. H.; Nolan, R. M.; Monroy, G. L.; Chaney, E. J.; Boppart, S. A., Differentiation of Bacterial versus Viral Otitis Media Using a Combined Raman Scattering Spectroscopy and Low Coherence Interferometry Probe. Photonic Therapeutics and Diagnostics XII 2016, 9689, DOI:Artn 96892e 10.1117/12.2211824.

    2015

    • Adie, S. G.; Shemonski, N. D.; Ralston, T. S.; Carney, P. S.; Boppart, S. A., Interferometric Synthetic Aperature Microscopy (ISAM), In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 965-1004.
    • Ahmad, A.; Huang, P. C.; Sobh, N. A.; Pande, P.; Kim, J.; Boppart, S. A., Mechanical Contrast in Spectroscopic Magnetomotive Optical Coherence Elastography. Physics in Medicine and Biology 2015, 60, (17), 6655-6668, DOI:10.1088/0031-9155/60/17/6655.
    • Ali, M.; Ahmad, A.; Boppart, S. A., DSP Technology and Methods for OCT, In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 437-458.
    • Boppart, S. A., Computational Adaptive Optics for Broadband Optical Interferometric Tomography of Biological Tissue. Adaptive Optics and Wavefront Control for Biological Systems 2015, 9335, DOI:Artn 933505 DOI:10.1117/12.2078050.
    • Boppart, S. A.; King, M. D.; Liu, Y.; Yu, H.; Gruebele, M., Nonlinear Inteferometric Vibrational Imaging (NIVI) with Novel Optical Sources, In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 1237-1256.
    • Cho, N. H.; Lee, S. H.; Jung, W.; Jang, J. H.; Boppart, S. A.; Kim, J., Optical Coherence Tomography for the Diagnosis and Evaluation of Human Otitis Media (Vol 30, Pg 328, 2015). Journal of Korean Medical Science 2015, 30, (6), 834-834, DOI:10.3346/jkms.2015.30.6.834.
    • Erickson-Bhatt, S. J.; Boppart, S. A., Biophotonics for Assessing Breast Cancer, In Biophotonics for Medical Applications. 1st ed.; Meglinski, I., Ed.; Woodhead Publishing, Cambridge, UK, 2015, 175-214.
    • Erickson-Bhatt, S. J.; Nolan, R. M.; Shemonski, N. D.; Adie, S. G.; Putney, J.; Darga, D.; McCormick, D. T.; Cittadine, A. J.; Zysk, A. M.; Marjanovic, M.; Chaney, E. J.; Monroy, G. L.; South, F. A.; Cradock, K. A.; Liu, Z. G.; Sundaram, M.; Ray, P. S.; Boppart, S. A., Real-Time Imaging of the Resection Bed Using a Handheld Probe to Reduce Incidence of Microscopic Positive Margins in Cancer Surgery. Cancer Research 2015, 75, (18), 3706-3712, DOI:10.1158/0008-5472.Can-15-0464.
    • Hubler, Z. M. L.; Shemonski, N. D.; Shelton, R. L.; Monroy, G. L.; Nolan, R. M.; Boppart, S. A., Real-Time Automated Thickness Measurements of the in Vivo Human Tympanic Membrane Using Optical Coherence Tomography. Quantitative Imaging in Medicine and Surgery 2015, 5, 66-77.
    • Jacobs, L. K.; Zysk, A.; Chen, K.; Tafra, L.; Gabrielson, E.; Gonzalez, E. A. M.; Canner, J. K.; Schneider, E. B.; Sawyer, K.; Boppart, S. A.; Cittadine, A. J., Intraoperative Imaging of Final Margins with a Handheld Optical Imaging Probe May Reduce the Breast-Conserving Surgery Re-Intervention Rate: Results of a Multicenter Study. Annals of Surgical Oncology 2015, 22, 62-62.
    • Kennedy, B. F.; Kennedy, K. M.; Oldenburg, A. L.; Adie, S. G.; Boppart, S. A.; Sampson, D. D., Optical Coherence Elastrography, In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 1007-1054.
    • Kim, J.; Ahmad, A.; Li, J.; Marjanovic, M.; Chaney, E. J.; Suslick, K. S.; Boppart, S. A., Intravascular Magnetomotive Optical Coherence Tomography of Targeted Early-Stage Atherosclerotic Changes in Ex Vivo Hyperlipidemic Rabbit Aortas. Journal of Biophotonics 2015, DOI:10.1002/jbio.201400128.
    • Li, J.; Bower, A. J.; Vainstein, V.; Gluzman-Poltorak, Z.; Chaney, E. J.; Marjanovic, M.; Basile, L. A.; Boppart, S. A., Effect of Recombinant Interleukin-12 on Murine Skin Regeneration and Cell Dynamics Using in vivo Multimodal Microscopy. Biomedical Optics Express 2015, 6, (11), 4277-4287, DOI:10.1364/Boe.6.004277.
    • Li, J.; Dobrucki, L. W.; Marjanovic, M.; Chaney, E. J.; Suslick, K. S.; Boppart, S. A., Enhancement and Wavelength-Shifted Emission of Cerenkov Luminescence Using Multifunctional Microspheres. Physics in Medicine and Biology 2015, 60, (2), 727-739, DOI:10.1088/0031-9155/60/2/727.
    • Liu, Y.; Zhao, Y. B.; Lyngso, J.; You, S. X.; Wilson, W. L.; Tu, H. H.; Boppart, S. A., Suppressing Short-Term Polarization Noise and Related Spectral Decoherence in All-Normal Dispersion Fiber Supercontinuum Generation. Journal of Lightwave Technology 2015, 33, (9), 1814-1820, DOI:10.1109/Jlt.2015.2397276.
    • Mesiwala, N. K.; Shemonski, N. D.; Sandrian, M.; Shelton, R. L.; Ishiwara, H.; Tawbi, H.; Schuman, J. S.; Boppart, S. A.; Labriola, L. T., Retinal Imaging with en face Optical Coherence Tomography to Delineate Photoreceptor Changes in Cancer Associated Retinopathy Secondary to Merkel Cell Carcinoma. Journal of Ophthalmic Inflammation Infection 2015, 5, 53, DOI:10.1186/s12348-015-0053-0.
    • Monroy, G. L.; Shelton, R. L.; Nolan, R. M.; Nguyen, C. T.; Novak, M. A.; Hill, M. C.; McCormick, D. T.; Boppart, S. A., Noninvasive Depth-Resolved Optical Measurements of the Tympanic Membrane and Middle Ear for Differentiating Otitis Media. Laryngoscope 2015, 125, (8), E276-E282, DOI:10.1002/lary.25141.
    • Monroy, G. L.; Sheton, R. L.; Nolan, R. M.; Nguyen, C. T.; Novak, M. A.; Hill, M. C.; McCormick, D. T.; Boppart, S. A., Non-Invasive Depth-Resolved Optical Measurement of the Tympanic Membrane and Middle-Ear for Differentiating Otitis Media. Laryngoscope 2015, DOI:10.1002/lary.25141.
    • Oldenburg, A. L.; Applegate, B. E.; Tucker-Schwartz, J. M.; Skala, M. C.; Kim, J.; Boppart, S. A., Molecular Oct Contrast Enhancement and Imaging, In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 1429-1454.
    • Ralston, T. S.; Marks, D. L.; Ahmad, A.; Boppart, S. A., Data Analysis and Signal Postprocessing for Optical Coherence Tomography, In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 407-436.
    • Shemonski, N. D.; Adie, S. G.; Liu, Y. Z.; South, F. A.; Carney, P. S.; Boppart, S. A., A Computational Approach to High-Resolution Imaging of the Living Human Retina without Hardware Adaptive Optics. Ophthalmic Technologies Xxv 2015, 9307, DOI:Artn 930710 DOI:10.1117/12.2078308.
    • Shemonski, N. D.; Adie, S. G.; South, F.; Liu, Y. Z.; Carney, P. S.; Boppart, S. A., Computational High-Resolution Optical Imaging of the Living Human Retina. Nature Photonics 2015, 9, 440-443, DOI:10.1038/nphoton.2015.102.
    • Shemonski, N. D.; South, F. A.; Liu, Y. Z.; Adie, S. G.; Carney, P. S.; Boppart, S. A., Computational High-Resolution Optical Imaging of the Living Human Retina. Nature Photonics 2015, 9, (7), 440-U477, DOI:10.1038/Nphoton.2015.102.
    • Shemonski, N. D.; South, F. A.; Liu, Y.-Z.; Adie, S. G.; Carney, P. S.; Boppart, S. A., Computational Aberration Correction for Imaging of the Human Retina. Optics in 2015, Optics and Photonics News 2015, 26, 43.
    • Shen, Y.; Monroy, G. L.; Derlon, N.; Janjaroen, D.; Huang, C. H.; Morgenroth, E.; Boppart, S. A.; Ashbolt, N. J.; Liu, W. T.; Nguyen, T. H., Role of Biofilm Roughness and Hydrodynamic Conditions in Legionella Pneumophila Adhesion to and Detachment from Simulated Drinking Water Biofilms. Environmental Science & Technology 2015, 49, (7), 4274-4282, DOI:10.1021/Es505842v.
    • South, F. A.; Liu, Y. Z.; Xu, Y.; Shemonski, N. D.; Carney, P. S.; Boppart, S. A., Polarization-Sensitive Interferometric Synthetic Aperture Microscopy. Applied Physics Letters 2015, 107, (21), DOI:Artn 211106 10.1063/1.4936236.
    • South, F. A.; Marjanovic, M.; Boppart, S. A., Intraoperative Oct in Surgical Oncology, In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 2392-2412.
    • Zhang, Y. F.; Yin, Q.; Yen, J.; Li, J. N.; Ying, H. Z.; Wang, H.; Hua, Y. Y.; Chaney, E. J.; Boppart, S. A.; Cheng, J. J., Non-Invasive, Real-Time Reporting Drug Release in Vitro and in Vivo. Chemical Communications 2015, 51, (32), 6948-6951, DOI:10.1039/C4cc09920f.
    • Zhao, Y.; Tu, H.; Liu, Y.; Bower, A. J.; Boppart, S. A., Enhancement of Optical Coherence Microscopy in Turbid Media by an Optical Parametric Amplifier. Journal of Biophotonics 2015, 8, (6), 512-521, DOI:10.1002/jbio.201400073.
    • Zhao, Y.; Yang, Y.; Wang, R. K.; Boppart, S. A., Optical Coherence Tomography in Tissue Engineering, In Optical Coherence Tomography: Technology and Applications. 2nd ed.; Drexler, W., Fujimoto, J. G., Eds.; Springer International Publishing, Switzerland, 2015, 1965-2001.
    • Zysk, A. M.; Chen, K.; Gabrielson, E.; Tafra, L.; Gonzalez, E. A. M.; Canner, J. K.; Schneider, E. B.; Cittadine, A. J.; Carney, P. S.; Boppart, S. A.; Tsuchiya, K.; Sawyer, K.; Jacobs, L. K., Intraoperative Assessment of Final Margins with a Handheld Optical Imaging Probe During Breast-Conserving Surgery May Reduce the Reoperation Rate: Results of a Multicenter Study. Annals of Surgical Oncology 2015, 22, (10), 3356-3362, DOI:10.1245/s10434-015-4665-2.

    2014

    • Crecea, V.; Graf, B. W.; Kim, T.; Popescu, G.; Boppart, S. A., High Resolution Phase-Sensitive Magnetomotive Optical Coherence Microscopy for Tracking Magnetic Microbeads and Cellular Mechanics. IEEE Journal of Selected Topics in Quantum Electronics 2014, 20, (2), DOI: 10.1109/jstqe.2013.2280501.
    • Erickson-Bhatt, S. J.; Nolan, R.; Shemonski, N. D.; Adie, S. G.; Putney, J.; Darga, D.; McCormick, D. T.; Cittadine, A.; Marjanovic, M.; Chaney, E. J.; Monroy, G. L.; South, F.; Carney, P. S.; Cradock, K. A.; Liu, Z. G.; Ray, P. S.; Boppart, S. A., In Vivo Intra-Operative Breast Tumor Margin Detection Using a Portable Oct System with a Handheld Surgical Imaging Probe, In Advanced Biomedical and Clinical Diagnostic and Surgical Guidance Systems Xii. VoDinh, T., MahadevanJansen, A., Grundfest, W. S., Eds.; Spie-Int Soc Optical Engineering, Bellingham, 2014; Vol. 8935.
    • Graf, B. W.; Bower, A. J.; Chaney, E. J.; Marjanovic, M.; Adie, S. G.; De Lisio, M.; Valero, M. C.; Boppart, M. D.; Boppart, S. A., In Vivo Multimodal Microscopy for Detecting Bone-Marrow-Derived Cell Contribution to Skin Regeneration. Journal of Biophotonics 2014, 7, (1-2), 96-102, DOI: 10.1002/jbio.201200240.
    • Kim, J.; Ahmad, A.; Marjanovic, M.; Chaney, E. J.; Hubler, Z.; Rasio, J.; Li, J.; Suslick, K. S.; Boppart, S. A., Localization of Atherosclerotic Lesions Using Targeted Magnetic Microspheres and Magnetomotive Optical Coherence Tomography. Molecular Imaging and Biology 2014, 16, 36-43.
    • Kim, J.; Ahmad, A.; Marjanovic, M.; Chaney, E. J.; Li, J.; Rasio, J.; Hubler, Z.; Spillman, D.; Suslick, K. S.; Boppart, S. A., Magnetomotive Optical Coherence Tomography for the Assessment of Atherosclerotic Lesions Using Alpha(V)Beta(3) Integrin-Targeted Microspheres. Molecular Imaging and Biology 2014, 16, (1), 36-43, DOI: 10.1007/s11307-013-0671-6.
    • Monroy, G. L.; Shemonski, N. D.; Shelton, R. L.; Nolan, R. M.; Boppart, S. A., Implementation and Evaluation of Google Glass for Visualizing Real-Time Image and Patient Data in the Primary Care Office, In Advanced Biomedical and Clinical Diagnostic and Surgical Guidance Systems Xii. VoDinh, T., MahadevanJansen, A., Grundfest, W. S., Eds.; Spie-Int Soc Optical Engineering, Bellingham, 2014; Vol. 8935.
    • Shelton, R. L.; Jung, W.; Sayegh, S. I.; McCormick, D. T.; Kim, J.; Boppart, S. A., Optical Coherence Tomography for Advanced Screening in the Primary Care Office. Journal of Biophotonics 2014, 7, 525-533, DOI: 10.1002/jbio.201200243.
    • Tu, H. H.; Boppart, S. A., Coherent Anti-Stokes Raman Scattering Microscopy: Overcoming Technical Barriers for Clinical Translation. Journal of Biophotonics 2014, 7, (1-2), 9-22, DOI: 10.1002/jbio.201300031.
    • Tu, H. H.; Zhao, Y. B.; Liu, Y.; Boppart, S. A., Static Third-Harmonic Lines in Widely Variable Fiber Continuum Generation. Physical Review A 2014, 89, (1), DOI: 10.1103/PhysRevA.89.013813.
    • Xu, Y.; Chng, X. K. B.; Adie, S. G.; Boppart, S. A.; Carney, P. S., Multifocal Interferometric Synthetic Aperture Microscopy. Optical Express 2014, 22, 1660616618.

    2013

    • Ahmad, A.; Shemonski, N. D.; Adie, S. G.; Kim, H. S.; Hwu, W. M. W.; Carney, P. S.; Boppart, S. A., Real-Time in Vivo Computed Optical Interferometric Tomography. Nature Photonics 2013, 7, (6), 445-449, DOI: 10.1038/nphoton.2013.71.
    • Boulos, S. P.; Prigozhin, M. B.; Liu, Y.; Wirth, A. J.; Boppart, S. A.; Gruebele, M.; Murphy, C. J., The Gold Nanorod-Biology Interface: From Proteins to Cells to Tissue. Current Physical Chemistry 2013, 3, 128-135.
    • Carney, P. S.; Adie, S. G.; Boppart, S. A., Interferometric Synthetic Aperture Microscopy, In Emerging Imaging Technologies in Medicine. Anastasio, M. A., LaRiviere, P., Eds.; CRC Press, 2013, Ch. 19, 293-301.
    • Cha, C.; Antoniadou, E.; Lee, M.; Jeong, J. H.; Ahmed, W. W.; Saif, T. A.; Boppart, S. A.; Kong, H., Tailoring Hydrogel Adhesion to Polydimethylsiloxane Substrates Using Polysaccharide Glue. Angewandte Chemie-International Edition 2013, DOI: 10.1002/ange.201302925.
    • Crecea, V.; Ahmad, A.; Boppart, S. A., Magnetomotive Optical Coherence Elastography for Microrheology of Biological Tissues. Journal of Biomedical Optics 2013, 18, (12), DOI: 10.1117/1.jbo.18.12.121504.
    • Graf, B. W.; Chaney, E. J.; Marjanovic, M.; Adie, S. G.; De Lisio, M.; Valero, M. C.; Boppart, M. D.; Boppart, S. A., Long-Term Time-Lapse Multimodal Intravital Imaging of Regeneration and Bone-Marrow-Derived Cell Dynamics in Skin. Technology 2013, 1, 1-12.
    • Graf, B. W.; Chaney, E. J.; Marjanovic, M.; De Lisio, M.; Valero, M. C.; Boppart, M. D.; Boppart, S. A., In Vivo Imaging of Immune Cell Dynamics in Skin in Response to Zinc-Oxide Nanoparticle Exposure. Biomedical Optics Express 2013, 4, (10), 1817-1828, DOI: 10.1364/boe.4.001817.
    • Janjaroen, D.; Ling, F. Q.; Monroy, G.; Derlon, N.; Mogenroth, E.; Boppart, S. A.; Liu, W. T.; Nguyen, T. H., Roles of Ionic Strength and Biofilm Roughness on Adhesion Kinetics of Escherichia Coli onto Groundwater Biofilm Grown on PVC Surfaces. Water Research 2013, 47, (7), 2531-2542, DOI: 10.1016/j.watres.2013.02.032.
    • Jeong, J. H.; Liang, Y.; Jang, M.; Cha, C.; Chu, C.; Lee, H.; Jung, W.; Kim, J. W.; Boppart, S. A.; Kong, H., Stiffness-Modulated Water Retention and Neovascularization of Dermal Fibroblast-Encapsulating Collagen Gel. Tissue Engineering Part A 2013, 19, (11-12), 1275-1284, DOI: 10.1089/ten.tea.2012.0230.
    • John, R.; Adie, S. G.; Chaney, E. J.; Marjanovic, M.; Tangella, K. V.; Boppart, S. A., Three-Dimensional Optical Coherence Tomography for Optical Biopsy of Lymph Nodes and Assessment of Metastatic Disease. Annals of Surgical Oncology 2013, 20, (11), 3685-3693, DOI: 10.1245/s10434-012-2434-z.
    • Jung, W.; Boppart, S. A., Optical Coherence Tomography for Rapid Tissue Screening and Directed Histological Sectioning. Biophotonics in Pathology: Pathology at the Crossroads 2013, 185, 109-128, DOI: 10.3233/978-1-61499-234-9-109.
    • Kim, J.; Ahmad, A.; Boppart, S. A., Dual-Coil Magnetomotive Optical Coherence Tomography for Contrast Enhancement in Liquids. Optics Express 2013, 21, (6), 7139-7147.
    • Liu, X. M.; Villanueva, G. E.; Laegsgaard, J.; Moller, U.; Tu, H. H.; Boppart, S. A.; Turchinovich, D., Low-Noise Operation of All-Fiber Femtosecond Cherenkov Laser. IEEE Photonics Technology Letters 2013, 25, (9), 892-895, DOI: 10.1109/lpt.2013.2253765.
    • Liu, Y.; King, M. D.; Tu, H. H.; Zhao, Y. B.; Boppart, S. A., Broadband Nonlinear Vibrational Spectroscopy by Shaping a Coherent Fiber Supercontinuum. Optics Express 2013, 21, (7), 8269-8275.
    • Lu, S. Y.; Wang, Y.; Huang, H.; Pan, Y. J.; Chaney, E. J.; Boppart, S. A.; Ozer, H.; Strongin, A. Y.; Wang, Y. X., Quantitative Fret Imaging to Visualize the Invasiveness of Live Breast Cancer Cells. Plos One 2013, 8, (3).
    • Nguyen, C. T.; Robinson, S. R.; Jung, W.; Novak, M. A.; Boppart, S. A.; Allen, J. B., Investigation of Bacterial Biofilm in the Human Middle Ear Using Optical Coherence Tomography and Acoustic Measurements. Hearing Research 2013, 301, 193-200, DOI: 10.1016/j.heares.2013.04.001.
    • Shelton, R.; Jung, W.; Sayegh, S. I.; McCormick, D. T.; Kim, J.; Boppart, S. A., Optical Coherence Tomography for Advanced Screening in the Primary Care Office. Journal of Biophotonics 2013, DOI: 10.1002/jbio.201300031.
    • Sun, J. G.; Adie, S. G.; Chaney, E. J.; Boppart, S. A., Segmentation and Correlation of Optical Coherence Tomography and X-Ray Images for Breast Cancer Diagnostics. Journal of Innovative Optical Health Sciences 2013, 6, (2).
    • Tu, H. H.; Boppart, S. A., Coherent Fiber Supercontinuum for Biophotonics. Laser & Photonics Reviews 2013, 7, (5), 628-645, DOI: 10.1002/lpor.201200014.
    • Tu, H. H.; Laegsgaard, J.; Zhang, R.; Tong, S.; Liu, Y.; Boppart, S. A., Bright Broadband Coherent Fiber Sources Emitting Strongly Blue-Shifted Resonant Dispersive Wave Pulses. Optics Express 2013, 21, (20), 23188-23196, DOI: 10.1364/oe.21.023188.
    • Tu, H.; Boppart, S. A., Coherent Anti-Stokes Raman Scattering Microscopy: Overcoming Technical Barriers for Clinical Translation. Journal of Biophotonics 2013, DOI: 10.1002/jbio.201300031.
    • Wang, R. K. K.; Sampson, D. D.; Boppart, S. A.; Kennedy, B. F., Optical Elastography and Measurement of Tissue Biomechanics. Journal of Biomedical Optics 2013, 18, (12), DOI: 10.1117/1.jbo.18.12.121501.
    • Wang, Y.; Shemonski, N. D.; Adie, S. G.; Boppart, S. A.; Insana, M. F. Dynamic Method of Optical Coherence Elastography in Determining Viscoelasticity of Polymers and Tissues, Conference Proceedings from IEEE Engineering in Medicine and Biology Society,  Osaka, Japan, July 3-7, 2013, 117-120.
    • Zhao, Y. B.; Bower, A. J.; Graf, B. W.; Boppart, M. D.; Boppart, S. A., Imaging and Tracking of Bone Marrow-Derived Immune and Stem Cells, In Imaging and Tracking Stem Cells: Methods and Protocols. Turksen, K., Ed.; Humana Press Inc, Totowa, 2013; Vol. 1052, Ch. 28, 57-76.

    2012

    • Adie, S. G.; Graf, B. W.; Ahmad, A.; Carney, P. S.; Boppart, S. A., Computational Adaptive Optics for Broadband Optical Interferometric Tomography of Biological Tissue. Proceedings of the National Academy of Sciences of the United States of America 2012, 109, (19), 7175-7180.
    • Adie, S. G.; Shemonski, N. D.; Graf, B. W.; Ahmad, A.; Carney, P. S.; Boppart, S. A., Guide-Star-Based Computational Adaptive Optics for Broadband Interferometric Tomography. Applied Physics Letters 2012, 101, (22).
    • Benalcazar, W. A.; Jung, W.; Boppart, S. A., Aberration Characterization for the Optimal Design of High-Resolution Endoscopic Optical Coherence Tomography Catheters. Optics Letters 2012, 37, (6), 1100-1102.
    • Benalcazar, W.; Boppart, S. A., Optical Coherence Imaging for Surgical Pathology Assessment, In Handbook of Biophotonics, Volume 2: Photonics for Health Care; Popp, J., Tuchin, V. V., Chiou, A., Heinemann, S., Eds.; Wiley-VCH, Verlag GmbH & Co., 2012, Ch. 13, 215-224.
    • Boppart, S. A., Visualizing Middle-Ear Biofilms in Otitis Media: A New Benchmark for Successful Treatment. ENT and Audiology News 2012, 21, 94-95.
    • Graf, B. W.; Boppart, S. A., Multimodal in Vivo Skin Imaging with Integrated Optical Coherence and Multiphoton Microscopy. IEEE Journal of Selected Topics in Quantum Electronics 2012, 18, (4), 1280-1286.
    • Ilev, I. K.; Boppart, S. A.; Andersson-Engels, S.; Kim, B. M.; Vo-Dinh, T., Introduction to the Issue on Biophotonics-Part 1. IEEE Journal of Selected Topics in Quantum Electronics 2012, 18, (3), 1039-1041.
    • Ilev, I. K.; Boppart, S. A.; Andersson-Engels, S.; Kim, B. M.; Vo-Dinh, T., Introduction to the Issue on Biophotonics-Part 2. IEEE Journal of Selected Topics in Quantum Electronics 2012, 18, (4), 1267-1269.
    • John, R.; Nguyen, F. T.; Kolbeck, K. J.; Chaney, E. J.; Marjanovic, M.; Suslick, K. S.; Boppart, S. A., Targeted Multifunctional Multimodal Protein-Shell Microspheres as Cancer Imaging Contrast Agents. Molecular Imaging and Biology 2012, 14, (1), 17-24.
    • Jung, W.; Boppart, S. A., Optical Coherence Tomography for Rapid Tissue Screening and Directed Histological Sectioning. Analytical Cellular Pathology 2012, 35, (3), 129-143.
    • Kuo, W.-C.; Kim, J.; Shemonski, N. D.; Chaney, E. J.; Spillman, D. R.; Boppart, S. A., Real-Time Three-Dimensional Optical Coherence Tomography Image-Guided Core-Needle Biopsy System. Biomedical Optics Express 2012, 3, 1141-1148.
    • Liu, X. M.; Laegsgaard, J.; Moller, U.; Tu, H. H.; Boppart, S. A.; Turchinovich, D., All-Fiber Femtosecond Cherenkov Radiation Source. Optics Letters 2012, 37, (13), 2769-2771.
    • Liu, Y.; Tu, H.; Benalcazar, W. A.; Chaney, E. J.; Boppart, S. A., Multimodal Nonlinear Microscopy by Shaping a Fiber Supercontinuum from 900 to 1160 Nm. IEEE Journal of Selected Topics in Quantum Mechanics – Biophotonics I 2012, 18, 1209-1214.
    • Liu, Y.; Tu, H.; Boppart, S. A., Wave-Breaking-Extended Fiber Supercontinuum Generation for High Compression-Ratio Transform-Limited Pulse Compression. Optics Letters 2012, 37, 2171-2174.
    • Nguyen, C. T.; Jung, W.; Kim, J.; Chaney, E. J.; Novak, M.; Stewart, C. N.; Boppart, S. A., Noninvasive in Vivo Optical Detection of Biofilm in the Human Middle Ear. Proceedings of the National Academy of Sciences of the United States of America 2012, 109, (24), 9529-9534.
    • Tu, H. H.; Liu, Y.; Liu, X. M.; Turchinovich, D.; Laegsgaard, J.; Boppart, S. A., Nonlinear Polarization Dynamics in a Weakly Birefringent All-Normal Dispersion Photonic Crystal Fiber: Toward a Practical Coherent Fiber Supercontinuum Laser. Optics Express 2012, 20, (2), 1113-1128.
    • Tu, H.; Boppart, S. A., Coherent Fiber Supercontinuum and Non-Supercontinuum Sources for Portable Biophotonics. Laser & Photonics Review 2012, DOI: 10.1002/lpor.201200014.
    • Tu, H.; Liu, Y.; Laegsgaard, J.; Turchinovich, D.; Siegel, M.; Kopf, D.; Li, H.; Gunaratne, T.; Boppart, S. A., Cross-Validation of Theoretically Quantified Fiber Continuum Generation and Absolute Pulse Measurement by MIIPS for a Broadband Coherently Controlled Optical Source. Applied Physics B-Lasers and Optics 2012, 106, (2), 379-384.
    • Zhao, Y. B.; Graf, B. W.; Chaney, E. J.; Mahmassani, Z.; Antoniadou, E.; DeVolder, R.; Kong, H.; Boppart, M. D.; Boppart, S. A., Integrated Multimodal Optical Microscopy for Structural and Functional Imaging of Engineered and Natural Skin. Journal of Biophotonics 2012, 5, (5-6), 437-448.

    2011

    • Benalcazar, W. A.; Boppart, S. A., Nonlinear interferometric vibrational imaging for fast label-free visualization of molecular domains in skin. Analytical and Bioanalytical Chemistry 2011, 400, (9), 2817-2825.
    • Chaney, E. J.; Nguyen, C. T.; Boppart, S. A., Novel method for non-invasive induction of a middle-ear biofilm in the rat. Vaccine 2011, 29, (8), 1628-1633.
    • Jeon, M.; Kim, J.; Jung, U.; Lee, C.; Jung, W.; Boppart, S. A., Full-range k-domain linearization in spectral-domain optical coherence tomography. Applied Optics 2011, 50, (8), 1158-1163.
    • John, R.; Boppart, S. A., Magnetomotive Molecular Nanoprobes. Current Medicinal Chemistry 2011, 18, (14), 2103-2114.
    • Jung, W.; Kim, J.; Jeon, M.; Chaney, E. J.; Stewart, C. N.; Boppart, S. A., Handheld Optical Coherence Tomography Scanner for Primary Care Diagnostics. IEEE Transactions on Biomedical Engineering 2011, 58, (3), 741-744.
    • Kennedy, B. F.; Liang, X.; Adie, S. G.; Gerstmann, D. K.; Quirk, B. C.; Boppart, S. A.; Sampson, D. D., In vivo three-dimensional optical coherence elastography. Optics Express 2011, 19, (7), 6623-6634.
    • Liang, X.; Graf, B. W.; Boppart, S. A., In Vivo Multiphoton Microscopy for Investigating Biomechanical Properties of Human Skin. Cellular and Molecular Bioengineering 2011, 4, (2), 231-238.

    2010

    • Ahmad, A.; Adie, S. G.; Wang, M.; Boppart, S. A., Sonification of optical coherence tomography data and images. Optics Express 2010, 18, (10), 9934-9944.
    • Boustany, N. N.; Boppart, S. A.; Backman, V., Microscopic imaging and spectroscopy with scattered light. Annual Review of Biomedical Engineering 2010, 12, 285-314.
    • Chaney, E. J.; Tang, L.; Tong, R.; Cheng, J.; Boppart, S. A., Lymphatic biodistribution of polylactide nanoparticles. Molecular Imaging 2010, 9, 153-162.
    • Chowdary, P. D.; Benalcazar, W. A.; Jiang, Z.; Marks, D. M.; Boppart, S. A.; Gruebele, M., High Speed Nonlinear Interferometric Vibrational Analysis of Lipids by Spectral Decomposition. Analytical Chemistry 2010, 82, (9), 3812-3818.
    • Jiang, Z.; Leaird, D. E.; Long, C. M.; Boppart, S. A.; Weiner, A. M., Optical arbitrary waveform characterization using linear spectrograms. Optics Communications 2010, 283, 3017-3021.
    • John, R.; Chaney, E. J.; Boppart, S. A., Dynamics of magnetic nanoparticle-based contrast agents in tissues tracked using magnetomotive optical coherence tomography. IEEE Journal of Selected Topics in Quantum Electronics 2010,16, 691-697.
    • John, R.; Rezaeipoor, R.; Adie, S. G.; Chaney, E. J.; Oldenburg, A. L.; Marjanovic, M.; Haldar, J. P.; Sutton, B. P.; Boppart, S. A., In vivo magnetomotive optical molecular imaging using targeted magnetic nanoprobes. Proceedings of the National Academy of Sciences of the United States of America 2010, 107, (18), 8085-8090.
    • Liang, X.; Adie, S. G.; John, R.; Boppart, S. A., Dynamic spectral-domain optical coherence elastography for tissue characterization. Optics Express 2010, 18, 14183-14190.
    • Liang, X.; Boppart, S. A., Biomechanical Properties of In Vivo Human Skin From Dynamic Optical Coherence Elastography. IEEE Transactions on Biomedical Engineering 2010, 57, (4), 953-959.
    • Nguyen, F. T.; Zysk, A. M.; Chaney, E. J.; Adie, S. G.; Kotynek, J. G.; Oliphant, U. J.; Bellafiore, F. J.; Rowland, K. M.; Johnson, P. A.; Boppart, S. A., Optical Coherence Tomography The Intraoperative Assessment of Lymph Nodes in Breast Cancer. IEEE Engineering in Medicine and Biology Magazine 2010, 29, (2), 63-70.
    • Oldenburg, A. L.; Boppart, S. A., Resonant acoustic spectroscopy of soft tissues using embedded magnetomotive nanotransducers and optical coherence tomography. Physics in Medicine and Biology 2010, 55, (4), 1189-1201.
    • Ralston, T. S.; Adie, S. G.; Marks, D. L.; Boppart, S. A.; Carney, P. S., Cross-validation of interferometric synthetic aperture microscopy and optical coherence tomography. Optics Letters 2010, 35, (10), 1683-1685.
    • Ralston, T. S.; Charvat, G. L.; Adie, S. G.; Davis, B. J.; Carney, P. S.; Boppart, S. A., Interferometric synthetic aperture microscopy: Microscopic laser radar. Optics and Photonics News 2010, 21, 32-38.
    • Adie, S. G.; Liang, X.; Kennedy, B. F.; John, R.; Sampson, D. D.; Boppart, S. A., Spectroscopic optical coherence elastography. Optics Express 2010, 18, (25), 25519-25534.
    • Benalcazar, W. A.; Chowdary, P. D.; Jiang, Z.; Marks, D. L.; Chaney, E. J.; Gruebele, M.; Boppart, S. A., High-Speed Nonlinear Interferometric Vibrational Imaging of Biological Tissue With Comparison to Raman Microscopy. IEEE Journal of Selected Topics in Quantum Electronics 2010, 16, (4), 824-832. 
    • Chowdary, P. D.; Jiang, Z.; Chaney, E. J.; Benalcazar, W. A.; Marks, D. L.; Gruebele, M.; Boppart, S. A., Molecular Histopathology by Spectrally Reconstructed Nonlinear Interferometric Vibrational Imaging. Cancer Research 2010, 70, (23), 9562-9569.
    • Chowdary, P. D.; Jiang, Z.; Chaney, E. J.; Benalcazar, W. A.; Marks, D. L.; Gruebele, M.; Boppart, S. A., Molecular Histopathology by Spectrally Reconstructed Nonlinear Interferometric Vibrational Imaging. Cancer Research 2010, 70, (23), 9562-9569. 
    • Ding, H. F.; Wang, Z.; Nguyen, F. T.; Boppart, S. A.; Millet, L. J.; Gillette, M. U.; Liu, J. M.; Boppart, M. D.; Popescu, G., Fourier Transform Light Scattering (FTLS) of Cells and Tissues. Journal of Computational and Theoretical Nanoscience 2010, 7, (12), 2501-2511.
    • Graf, B. W.; Adie, S. G.; Boppart, S. A., Correction of coherence gate curvature in high numerical aperture optical coherence imaging. Optics Letters 2010, 35, (18), 3120-3122.
    • Graf, B. W.; Boppart, S. A., Imaging and analysis of three-dimensional cell culture models. In Methods in Molecular Biology: Live Cell Imaging, Papkovsky, D., Ed. Humana Press: 2010; Vol. 591, pp 211-227.
    • Graf, B. W.; Chaney, E. J.; Valero, M. C.; Marjanovic, M.; Boppart, M. D.; Boppart, S. A. Long-term, time-lapse, multi-modal microscopy for tracking cell dynamics in live tissue, Proceedings of SPIE – The International Society for Optics and Photonics, 2010.
    • Ilev, I. K.; Wang, L. V.; Boppart, S. A.; Andersson-Engels, S.; Kim, B. M., Introduction to the Special Issue on Biophotonics - Part 2. IEEE Journal of Selected Topics in Quantum Electronics 2010, 16, (4), 703-705.
    • John, R.; Boppart, S. A., Scattering, absorbing, and modulating nanoprobes for coherence imaging. In Nanobiophotonics, Popescu, G., Ed. McGraw-Hill: 2010.
    • Jung, W.; Benalcazar, W.; Ahmad, A.; Sharma, U.; Tu, H.; Boppart, S. A., Numerical analysis of gradient index lens-based optical coherence tomography imaging probes. Journal of Biomedical Optics 2010, 15, (6).
    • Liang, X.; Crecea, V.; Boppart, S. A., Dynamic optical coherence elastography: A review. J Innovative Optical Health Sciences 2010, 3, 221-233.
    • Nguyen, C. T.; Tu, H.; Chaney, E. J.; Stewart, C. N.; Boppart, S. A., Non-invasive optical interferometry for the assessment of biofilm growth in the middle ear. Biomedical Optics Express 2010, 1, 1104-1116.
    • Sharma, U.; Boppart, S. A., Optical low-coherence interferometric techniques for applications in nanomedicine. In Nanobiophotonics, Popescu, G., Ed. McGraw-Hill: 2010.
    • Shin, S.; Sharma, U.; Tu, H. H.; Jung, W.; Boppart, S. A., Characterization and Analysis of Relative Intensity Noise in Broadband Optical Sources for Optical Coherence Tomography. IEEE Photonics Technology Letters 2010, 22, (14), 1057-1059.
    • Tu, H. H.; Liu, Y. A.; Laegsgaard, J.; Sharma, U.; Siegel, M.; Kopf, D.; Boppart, S. A., Scalar generalized nonlinear Schrodinger equation-quantified continuum generation in an all-normal dispersion photonic crystal fiber for broadband coherent optical sources. Optics Express 2010, 18, (26), 27872-27884.
    • Tu, H.; Shin, S.; John, R.; Boppart, S. A., Long-period fiber gratings spontaneously written by a mechanism markedly different from Hill grating formation. Applied Physics Letters 2010, 97, (12).

    2009

    • Crecea, V.; Oldenburg, A. L.; Liang, X.; Ralston, T. S.; Boppart, S. A., Magnetomotive nanoparticle transducers for optical rheology of viscoelastic materials. Optics Express 2009, 17, (25), 23114-23122.
    • Geddes, J. B.; Marks, D. L.; Boppart, S. A., Design of matched optical pulses for coherent Raman imaging. Optics and Photonics News 2009, 20, (12), 31.
    • Graf, B. W.; Jiang, Z.; Tu, H. H.; Boppart, S. A., Dual-spectrum laser source based on fiber continuum generation for integrated optical coherence and multiphoton microscopy. Journal of Biomedical Optics 2009, 14, (3).
    • Graf, B. W.; Ralston, T. S.; Ko, H. J.; Boppart, S. A., Detecting intrinsic scattering changes correlated to neuron action potentials using optical coherence imaging. Optics Express 2009, 17, (16), 13447-13457.
    • Graf, B.; Boppart, S. A., Intrinsic optical scattering changes correlated to electrical activity from single neurons. In SPIE Newsroom, 2009; Vol. 10.1117/2.1200909.1810.
    • Liang, X.; Crecea, V.; Orenscanin, M.; Insana, M. F.; Boppart, S. A., Measurements of biomechanics by dynamic optical coherence elastography. Optics and Photonics News 2009, 20, (12), 18.
    • Liang, X.; Graf, B. W.; Boppart, S. A., Imaging engineered tissues using structural and functional optical coherence tomography. Journal of Biophotonics 2009, 2, (11), 643-655.
    • Liang, X.; Orescanin, M.; Toohey, K. S.; Insana, M. F.; Boppart, S. A., Acoustomotive optical coherence elastography for measuring material mechanical properties. Optics Letters 2009, 34, (19), 2894-2896.
    • Marks, D. L.; Geddes, J. B.; Boppart, S. A., Molecular identification by generating coherence between molecular normal modes using stimulated Raman scattering. Optics Letters 2009, 34, (12), 1756-1758.
    • Nguyen, F. T.; Zysk, A. M.; Chaney, E. J.; Kotynek, J. G.; Oliphant, U. J.; Bellafiore, F. J.; Rowland, K. M.; Johnson, P. A.; Boppart, S. A., Intraoperative Evaluation of Breast Tumor Margins with Optical Coherence Tomography.Cancer Research 2009, 69, (22), 8790-8796.
    • Oldenburg, A. L.; Hansen, M. N.; Ralston, T. S.; Wei, A.; Boppart, S. A., Imaging gold nanorods in excised human breast carcinoma by spectroscopic optical coherence tomography. Journal of Materials Chemistry 2009, 19, (35), 6407-6411.
    • Rezaeipoor, R.; Chaney, E. J.; Oldenburg, A. L.; Boppart, S. A., Expression Order of Alpha-v and Beta-3 Integrin Subunits in the N-Methyl-N-Nitrosourea-Induced Rat Mammary Tumor Model. Cancer Investigation 2009, 27, (5), 496-503.
    • Rezaeipoor, R.; John, R.; Adie, S. G.; Chaney, E. J.; Marjanovic, M.; Oldenburg, A. L.; Rinne, S. A.; Boppart, S. A., Fc-directed antibody conjugation of magnetic nanoparticles for enhanced molecular targeting. Journal Innovative Optical Health Sciences 2009, 2, (4), 387-396.
    • Tu, H. H.; Boppart, S. A., Targeted pulse-energy routing in fiber drives nonsupercontinuum applications. Laser Focus World 2009, 45, (7), 56-59.
    • Tu, H. H.; Boppart, S. A., Ultraviolet-visible non-supercontinuum ultrafast source enabled by switching single silicon strand-like photonic crystal fibers. Optics Express 2009, 17, (20), 17983-17988.
    • Zysk, A. M.; Nguyen, F. T.; Chaney, E. J.; Kotynek, J. G.; Oliphant, U. J.; Bellafiore, F. J.; Johnson, P. A.; Rowland, K. M.; Boppart, S. A., Clinical Feasibility of Microscopically-Guided Breast Needle Biopsy Using a Fiber-Optic Probe with Computer-Aided Detection. Technology in Cancer Research & Treatment 2009, 8, (5), 315-321.
    • Ahmad, A.; Adie, S. G.; Chaney, E. J.; Sharma, U.; Boppart, S. A., Cross-correlation-based image acquisition technique for manually-scanned optical coherence tomography. Optics Express 2009, 17, (10), 8125-8136.
    • Ding, H. F.; Nguyen, F.; Boppart, S. A.; Popescu, G., Optical properties of tissues quantified by Fourier-transform light scattering. Optics Letters 2009, 34, (9), 1372-1374.
    • Graf, B. W.; Jiang, Z.; Tu, H.; Boppart, S. A., Dual-spectrum laser source based on fiber continuum generation for integrated optical coherence and multiphoton microscopy. Journal of Biomedical Optics 2009, 14, 034019.
    • Marks, D. L.; Davis, B. J.; Boppart, S. A.; Carney, P. S., Partially coherent illumination in full-field interferometric synthetic aperture microscopy. Journal of the Optical Society of America a-Optics Image Science and Vision 2009, 26, (2), 376-386.
    • Marks, D. L.; Geddes, J. B.; Boppart, S. A., Molecular identification by generating coherence between molecular normal modes using stimulated Raman scattering. Optics Letters 2009, 34, 1756-1758.
    • Nguyen, F. T.; Zysk, A. M.; Chaney, E. J.; Kotynek, J. G.; Oliphant, U. J.; Bellafiore, F. J.; Rowland, K. M.; Johnson, P. A.; Boppart, S. A., Optical coherence tomography (OCT) as a diagnostic tool for the real-time intraoperative assessment of breast cancer surgical margins. Cancer Research 2009, 69, (2), 101S-101S.
    • Rezaeipoor, R.; Chaney, E. J.; Oldenburg, A. L.; Boppart, S. A., Expression Order of Alpha-v and Beta-3 Integrin Subunits in the N-Methyl-N-Nitrosourea-Induced Rat Mammary Tumor Model. Cancer Investigation 2009, 27, (5), 496-503.
    • Tu, H. H.; Liang, X.; Marks, D. L.; Boppart, S. A., Emergence of self-organized long-period fiber gratings in supercontinuum-generating optical fibers. Optics Letters 2009, 34, (5), 668-670.
    • Tu, H.; Boppart, S. A., Optical frequency up-conversion by supercontinuum-free widely-tunable fiber-optic Cherenkov radiation. Optics Express 2009, 17, 9858-9872.
    • Tu, H.; Jiang, Z.; Marks, D. L.; Boppart, S. A., Intermodal four-wave mixing from femtosecond pulse-pumped photonic crystal fiber. Applied Physics Letters 2009, 94, (10).

    2008

    • Chelliyil, R. G.; Ralston, T. S.; Marks, D. L.; Boppart, S. A., High-speed processing architecture for spectral-domain optical coherence microscopy. Journal of Biomedical Optics 2008, 13, (4), 044013.
    • Davis, B. J.; Marks, D. L.; Ralston, T. S.; Carney, P. S.; Boppart, S. A.; Interferometric synthetic aperture microscopy: computed imaging for scanned coherent microscopy. Sensors 2008, 8, 3903-3931.
    • Ding, H. F.; Wang, Z.; Nguyen, F.; Boppart, S. A.; Popescu, G., Fourier Transform Light Scattering of Inhomogeneous and Dynamic Structures. Physical Review Letters 2008, 101, (23).
    • Liang, X.; Oldenburg, A. L.; Crecea, V.; Chaney, E. J.; Boppart, S. A., Optical micro-scale mapping of dynamic biomechanical tissue properties. Optics Express 2008, 16, (15), 11052-11065.
    • Marks, D. L.; Chaney, E. J.; Boppart, S. A., Plastinated tissue samples as three-dimensional models for optical instrument characterization. Optics Express 2008, 16, (20), 16272-16283.
    • Marks, D. L.; Schlachter, S. C.; Zysk, A. M.; Boppart, S. A.; Group refractive index reconstruction with broadband interferometric confocal microscopy. JOSA A 2008, 25, 1156-1164.
    • Oldenburg, A. L.; Crecea, V.; Rinne, S. A.; Boppart, S. A., Phase-resolved magnetomotive OCT for imaging nanomolar concentrations of magnetic nanoparticles in tissues. Optics Express 2008, 16, (15), 11525-11539.
    • Ralston, T. S.; Marks, D. L.; Carney, P. S.; Boppart, S. A., Real-time interferometric synthetic aperture microscopy. Optics Express 2008, 16, (4), 2555-2569.
    • Ralston, T. S.; Adie, S. G.; Marks, D. L.; Davis, B. J.; Carney, P. S.; Boppart, S. A., Real-time interferometric synthetic aperture microscopy for clinical applications. Optics in 2008, Optics and Photonics News 2008, 19, (32).
    • Tu, H. H.; Jiang, Z.; Marks, D. L.; Boppart, S. A., Anomalous bending effect in photonic crystal fibers. Optics Express 2008, 16, (8), 5617-5622.
    • Tu, H. H.; Koh, Y. L.; Marks, D. L.; Boppart, S. A., Localized waveguide formation in germanosilicate fiber transmitting femtosecond IR pulses. Journal of the Optical Society of America B-Optical Physics 2008, 25, (2), 274-278.
    • Tu, H.; Marks, D. L.; Jiang, Z.; Boppart, S. A., Photoscattering effect in supercontinuum-generating photonic crystal fiber. Applied Physics Letters 2008, 92, (6).

    2007

    • Choi, J. H.; Nguyen, F. T.; Barone, P. W.; Heller, D. A.; Moll, A. E.; Patel, D.; Boppart, S. A.; Strano, M. S.; Multimodal biomedical imaging with asymmetric single-walled carbon nanotube/iron oxide nanoparticle complexes. Nano Letters 2007, 7, (4), 861-867.
    • Davis, B. J.; Schlachter, S. C.; Marks, D. L.; Ralston, T. S.; Boppart, S. A.; Carney, P. S.; Nonparaxial vector-field modeling of optical coherence tomography and interferometric synthetic aperture microscopy. JOSA A 2007, 24, 2527-2542.
    • Marks, D. L.; Ralston, T. S.; Boppart, S. A.; Carney, P. S. Inverse scattering for frequency-scanned full-field optical coherence tomography. Journal of the Optical Society of America a-Optics Image Science and Vision 2007, 24, (4), 1034-1041.
    • Oldenburg, A. L.; Xu, C. Y.; Boppart, S. A., Spectroscopic optical coherence tomography and microscopy. IEEE Journal of Selected Topics in Quantum Electronics 2007, 13, (6), 1629-1640.
    • Ralston, T. S.; Marks, D. L.; Carney, P. S.; Boppart, S. A. Interferometric synthetic aperture microscopy. Nature Physics 2007, 3, (2), 129-134.
    • Tan, W.; Vinegoni, C.; Norman, J. J.; Desai, T. A.; Boppart, S. A. Imaging cellular responses to mechanical stimuli within three-dimensional tissue constructs. Microscopy Research and Technique 2007, 70, (4), 361-371.
    • Tu, H.; Marks, D. L.; Koh, Y. L.; Boppart, S. A., Stabilization of continuum generation from normally dispersive nonlinear optical fibers for a tunable broad bandwidth source for optical coherence tomography. Optics Letters 2007, 32, (14), 2037-2039.
    • Zysk, A. M.; Nguyen, F. T.; Oldenburg, A. L.; Marks, D. L.; Boppart, S. A., Optical coherence tomography: a review of clinical development from bench to bedside. Journal of Biomedical Optics 2007, 12, (5).
    • Zysk, A. M.; Marks, D. L.; Liu, D. Y.; Boppart, S. A. Needle-based reflection refractometry of scattering samples using coherence-gated detection. Optics Express 2007, 15, (8), 4787-4794.